From b1a2f627040860055bf20bb33ea40643d5d61617 Mon Sep 17 00:00:00 2001 From: Zhiming Wang Date: Wed, 26 Oct 2016 12:16:30 -0400 Subject: 20161026 pyenv: compiling Python with SQLite in nonstandard location --- ...g-python-with-sqlite-in-nonstandard-location.md | 48 ++++++++++++++++++++++ 1 file changed, 48 insertions(+) create mode 100644 source/blog/2016-10-26-pyenv-compiling-python-with-sqlite-in-nonstandard-location.md (limited to 'source/blog/2016-10-26-pyenv-compiling-python-with-sqlite-in-nonstandard-location.md') diff --git a/source/blog/2016-10-26-pyenv-compiling-python-with-sqlite-in-nonstandard-location.md b/source/blog/2016-10-26-pyenv-compiling-python-with-sqlite-in-nonstandard-location.md new file mode 100644 index 00000000..0ce3f9e8 --- /dev/null +++ b/source/blog/2016-10-26-pyenv-compiling-python-with-sqlite-in-nonstandard-location.md @@ -0,0 +1,48 @@ +--- +title: "pyenv: compiling Python with SQLite in nonstandard location" +date: 2016-10-26T12:16:22-04:00 +date_display: October 26, 2016 +--- + +This is a quick post sharing a workaround that I needed just now. + +I was trying to compile Pythons with pyenv on a RHEL 6.8 cluster. Unfortunately `sqlite-devel` is not installed and I doubt I can convince my sysadmin to install a package for me. The lack of SQLite headers resulted in Pythons without `_sqlite3` which is essential for me. Hitting at SQLite headers from Linuxbrew with `CPATH` did not help either. + +Digging into CPython source code, turns out that CPython only looks into [a fixed set of paths](https://github.com/python/cpython/blob/59fa72e34da71fb24f52251c1cc88ed3c3b14797/setup.py#L1132-L1138): + +```python +sqlite_inc_paths = [ '/usr/include', + '/usr/include/sqlite', + '/usr/include/sqlite3', + '/usr/local/include', + '/usr/local/include/sqlite', + '/usr/local/include/sqlite3', + ] +if cross_compiling: + sqlite_inc_paths = [] +``` + +Well that's unfortunate. Luckily pyenv makes it really easy to patch Python source code; take a look at [`plugins/python-build/share/python-build/patches`](https://github.com/yyuu/pyenv/tree/master/plugins/python-build/share/python-build/patches) and you'll get the idea. Therefore, in the case of Linuxbrew'ed pyenv and SQLite, say we want to build Python 3.5.2 with SQLite support, we simply put the following patch at `~/.linuxbrew/opt/pyenv/plugins/python-build/share/python-build/patches/3.5.2/Python-3.5.2/linuxbrew-sqlite3.patch`: + +```diff +diff --git a/setup.py b/setup.py +index 174ce72..774fd65 100644 +--- a/setup.py ++++ b/setup.py +@@ -1108,6 +1108,7 @@ class PyBuildExt(build_ext): + '/usr/local/include', + '/usr/local/include/sqlite', + '/usr/local/include/sqlite3', ++ os.path.expanduser('~/.linuxbrew/opt/sqlite/include/'), + ] + if cross_compiling: + sqlite_inc_paths = [] +``` + +That's it. Now + +``` +$ pyenv install 3.5.2 +``` + +and enjoy. -- cgit v1.2.1